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Installation
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Dependencies
=============

Kaptive requires the following software and libraries, if installing from source they will need to be installed and
available in your path:

* `Python <https://python.org/>`_ >=3.9
* `Biopython <https://biopython.org/>`_ >=1.83
* `minimap2 <https://lh3.github.io/minimap2/>`_
* `DNA Features Viewer <https://edinburgh-genome-foundry.github.io/DnaFeaturesViewer/>`_


Download and install Kaptive
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From PyPI::

    pip install kaptive

From Bioconda::

    conda install -c bioconda kaptive

From source::

    pip install git+https://github.com/klebgenomics/Kaptive.git

